network v4.6 software (FLUXUS ENGINEERING LIMITED)
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Network V4.6 Software, supplied by FLUXUS ENGINEERING LIMITED, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/network+v4%2E6+software/pmc07938780-92-15-49?v=FLUXUS+ENGINEERING+LIMITED
Average 90 stars, based on 1 article reviews
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1) Product Images from "Genetic variation of Nigerian cattle inferred from maternal and paternal genetic markers"
Article Title: Genetic variation of Nigerian cattle inferred from maternal and paternal genetic markers
Journal: PeerJ
doi: 10.7717/peerj.10607
Figure Legend Snippet: (A) Map of cattle sampling locations in Nigeria (Zamfara, Kano, Katsina, Kaduna and Sokoto from North West; Taraba and Plateau from North East/Central; and Oyo from the West) and the haplogroup distribution based on mtDNA across Africa . The maps of Africa and Nigeria were generated by an online version of the SmartDraw 2012 software ( https://cloud.smartdraw.com/editor.aspx?templateId=3a99cb96-00dd-4767-bca6-61a59bd9ad60&flags=128 ). (B) Median-joining network of 420 cattle samples constructed by using NETWORK v 4.6 . Reference sequences used for haplotype network analysis included: Europe, n = 76 ( ; ; ; ; and AF034438 – AF034446 were retrieved from the GenBank); West Asia, n = 16 ; Egypt, n = 31 ( ; ); Ethiopia, n = 126 ( ; ); Mozambique, n = 16 ( JQ684029 – JQ684045 were retrieved from the GenBank), South Africa, n = 34 and two additional Nigerian samples mined from GenBank (Accession no. L27731 and L27730 ). Sizes of the circles are proportional to haplotype frequencies. m , refers to number of mutation steps and those not indicated are just one step mutation. Colours indicate the geographical distribution of the sampling locations across Africa, Europe and West Asia as shown by the legend in (B).
Techniques Used: Sampling, Generated, Software, Construct, Mutagenesis
Figure Legend Snippet: Genetic diversity of cattle in Africa based on mtDNA D-Loop.
Techniques Used:
Figure Legend Snippet: Mutations that describe the distinction of the three major haplogroups of cattle based on ZFY intron 10 gene. The two genomic sites that separate each distinct haplogroup are in bold. The seven mutations observed in Nigerian cattle are italicized.
Techniques Used:
Figure Legend Snippet: Sizes of the circles are proportional to haplotype frequencies and the number of mutation steps in each branch are given. Colours indicate the geographical distribution of the samples as follows: dark green, Nigeria; orange, Asia; and blue, Europe. The source of the data for the Y haplogroups was retrieved from , , MF683853 , MF683854 were retrieved from the GenBank.
Techniques Used: Mutagenesis